Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 MTDHP5-201ENST00000598980 586 ntBASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 AL078644.1-201ENST00000609881 752 ntBASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SRFBP1Q8NEF9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 ALOX12P2-203ENST00000570921 1945 ntBASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 AC023274.1-201ENST00000418278 595 ntBASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 POLD2P1-201ENST00000511220 997 ntBASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PGAM5P1-201ENST00000518923 814 ntBASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 FAM86C2P-203ENST00000528684 1004 ntBASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SRFBP1Q8NEF9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 ACTG1P14-201ENST00000446382 1122 ntBASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SRFBP1Q8NEF9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms