Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 IGHV3-42-201ENST00000520410 361 ntBASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC155Q8N6L0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 WASH6P-202ENST00000359512 1437 ntBASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC155Q8N6L0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCDC155Q8N6L0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC155Q8N6L0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC155Q8N6L0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 TSPY16P-201ENST00000449843 468 ntBASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 AC026150.2-201ENST00000564693 1156 ntBASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 AF228730.6-201ENST00000641497 218 ntBASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 AC084121.3-201ENST00000641716 218 ntBASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 AC105233.6-201ENST00000642093 218 ntBASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC155Q8N6L0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC155Q8N6L0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms