Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 TTTY23B-201ENST00000442790 549 ntBASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.91□□□□□ -0.02
RP1L1Q8IWN7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 MIR4492-201ENST00000581627 80 ntBASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RP1L1Q8IWN7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 AL589739.1-201ENST00000607720 493 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms