Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 PCDHA12-202ENST00000613593 2588 ntBASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC60Q8IWA6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 ALOX12P2-203ENST00000570921 1945 ntBASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 OR6D1P-202ENST00000641007 5290 ntBASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 U82695.1-201ENST00000635752 1889 ntBASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC60Q8IWA6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.21■□□□□ 0.5
CCDC60Q8IWA6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 RPL37AP1-201ENST00000412502 279 ntBASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 MRPS18AP1-201ENST00000414458 589 ntBASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 TEX28P1-201ENST00000613479 1221 ntBASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 TEX28P2-201ENST00000617764 1221 ntBASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC60Q8IWA6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC60Q8IWA6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms