Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.54■□□□□ 0.24
CRLF3Q8IUI8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 SIGLEC30P-201ENST00000455569 941 ntBASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 AC023824.1-201ENST00000562945 2975 ntBASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 AC011467.2-201ENST00000598425 242 ntBASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CRLF3Q8IUI8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 AC144831.1-201ENST00000573312 2656 ntBASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.52■□□□□ 0.24
CRLF3Q8IUI8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 INTS4P1-201ENST00000438455 1935 ntBASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CRLF3Q8IUI8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.51■□□□□ 0.23
CRLF3Q8IUI8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms