Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 AC109462.3-201ENST00000573934 613 ntBASIC16.33■□□□□ 0.2
HPS6Q86YV9 AP001160.2-201ENST00000596071 487 ntBASIC16.33■□□□□ 0.2
HPS6Q86YV9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 AC005593.1-201ENST00000624894 515 ntBASIC16.33■□□□□ 0.2
HPS6Q86YV9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.33■□□□□ 0.2
HPS6Q86YV9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HPS6Q86YV9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 AC004967.1-201ENST00000453589 447 ntBASIC16.32■□□□□ 0.2
HPS6Q86YV9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 IGHV3-52-201ENST00000519770 353 ntBASIC16.32■□□□□ 0.2
HPS6Q86YV9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
HPS6Q86YV9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.32■□□□□ 0.2
HPS6Q86YV9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS6Q86YV9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.32■□□□□ 0.2
HPS6Q86YV9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 AC010327.4-202ENST00000591484 748 ntBASIC16.31■□□□□ 0.2
HPS6Q86YV9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS6Q86YV9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS6Q86YV9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms