Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
VRK2Q86Y07 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 CRYGEP-201ENST00000412192 528 ntBASIC15.25■□□□□ 0.03
VRK2Q86Y07 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 SLC25A6P4-201ENST00000586535 553 ntBASIC15.25■□□□□ 0.03
VRK2Q86Y07 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 AC005622.1-201ENST00000636801 1703 ntBASIC15.25■□□□□ 0.03
VRK2Q86Y07 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
VRK2Q86Y07 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
VRK2Q86Y07 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 AL162727.3-201ENST00000635661 2787 ntBASIC15.24■□□□□ 0.03
VRK2Q86Y07 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 AC009078.2-202ENST00000463353 338 ntBASIC15.24■□□□□ 0.03
VRK2Q86Y07 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 IGHV3-22-201ENST00000520721 359 ntBASIC15.24■□□□□ 0.03
VRK2Q86Y07 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 AL031432.2-201ENST00000566714 459 ntBASIC15.24■□□□□ 0.03
VRK2Q86Y07 AL928711.1-201ENST00000570165 459 ntBASIC15.24■□□□□ 0.03
VRK2Q86Y07 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.24■□□□□ 0.03
VRK2Q86Y07 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
VRK2Q86Y07 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
VRK2Q86Y07 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.23■□□□□ 0.03
VRK2Q86Y07 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
VRK2Q86Y07 AL139384.1-201ENST00000612143 3047 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms