Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AC005915.1-201ENST00000624912 2018 ntBASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 TPRX2P-201ENST00000535362 881 ntBASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AC123567.1-201ENST00000548294 1261 ntBASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 SRD5A3P1-201ENST00000603021 949 ntBASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 AC020907.1-201ENST00000616460 1350 ntBASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
OTOP1Q7RTM1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AC022211.2-201ENST00000585075 2527 ntBASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AL583810.1-201ENST00000553344 1045 ntBASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 CYP2A7P1-201ENST00000595391 815 ntBASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
OTOP1Q7RTM1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 AC098850.1-201ENST00000419919 790 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 MEP1AP4-201ENST00000423244 1087 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 AC023310.3-201ENST00000557027 670 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 AC100756.1-201ENST00000562736 682 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 AC138749.3-201ENST00000567691 622 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 AC116165.1-201ENST00000611806 668 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms