Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 DUSP5P1-201ENST00000441325 1139 ntBASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 AL355877.3-201ENST00000622820 899 ntBASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 AL139288.1-201ENST00000623748 933 ntBASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM53Q6P2H8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 AL450487.1-201ENST00000426799 995 ntBASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM53Q6P2H8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AC004870.1-201ENST00000315132 882 ntBASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.18■□□□□ 0.02
TMEM53Q6P2H8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms