Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL1Q6NVV3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL1Q6NVV3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 PMS2P4-201ENST00000412466 1052 ntBASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 KRT18P2-201ENST00000447938 1258 ntBASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 AC092068.3-201ENST00000587894 2016 ntBASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 AC025580.3-201ENST00000617932 1424 ntBASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL1Q6NVV3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 MCCD1P2-201ENST00000423228 335 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AP000347.1-202ENST00000435868 847 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 HLA-J-202ENST00000469281 1241 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AL671883.3-201ENST00000603274 991 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AC068137.2-201ENST00000605408 478 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 AC060834.1-201ENST00000443027 2032 ntBASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NIPAL1Q6NVV3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms