Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 POU5F1P6-201ENST00000466990 990 ntBASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 AL359711.2-201ENST00000563105 872 ntBASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC42BPAQ5VT25 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 SNX12-206ENST00000622259 661 ntTSL 5 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 RERG-209ENST00000546331 1383 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 TUBB1P2-201ENST00000422712 1306 ntBASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 TUBB1P1-201ENST00000503144 1300 ntBASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 AC093525.8-201ENST00000624099 1342 ntBASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 STX1A-203ENST00000395155 783 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 TDH-203ENST00000531764 1110 ntBASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 AC244669.2-201ENST00000612320 853 ntBASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC42BPAQ5VT25 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 APOA1-205ENST00000375329 927 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 AC136604.1-201ENST00000418535 575 ntBASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 KRT90P-201ENST00000549264 1064 ntBASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 AL583810.1-201ENST00000553344 1045 ntBASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 MSTO2P-201ENST00000314835 1709 ntBASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC24.4■■□□□ 1.5
CDC42BPAQ5VT25 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 APRT-204ENST00000563655 709 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 AC133539.2-201ENST00000604757 467 ntBASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 AC005252.2-201ENST00000624630 1141 ntBASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 AC009053.2-201ENST00000563701 2365 ntBASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CDC42BPAQ5VT25 AP001094.4-201ENST00000579008 2176 ntBASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC42BPAQ5VT25 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms