Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.75□□□□□ -0.05
SCN1BQ07699 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.75□□□□□ -0.05
SCN1BQ07699 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.75□□□□□ -0.05
SCN1BQ07699 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.75□□□□□ -0.05
SCN1BQ07699 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.75□□□□□ -0.05
SCN1BQ07699 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 PPT1-215ENST00000641471 2368 ntBASIC14.75□□□□□ -0.05
SCN1BQ07699 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SCN1BQ07699 AC125634.1-201ENST00000438758 1403 ntBASIC14.75□□□□□ -0.05
SCN1BQ07699 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.74□□□□□ -0.05
SCN1BQ07699 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.74□□□□□ -0.05
SCN1BQ07699 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 TUBB8P12-201ENST00000308911 1335 ntBASIC14.74□□□□□ -0.05
SCN1BQ07699 TUBB7P-202ENST00000428444 1305 ntBASIC14.74□□□□□ -0.05
SCN1BQ07699 TUBB8P7-204ENST00000567960 1332 ntBASIC14.74□□□□□ -0.05
SCN1BQ07699 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SCN1BQ07699 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.74□□□□□ -0.05
SCN1BQ07699 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.74□□□□□ -0.05
SCN1BQ07699 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SCN1BQ07699 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SCN1BQ07699 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 AL121672.3-201ENST00000608644 468 ntBASIC14.74□□□□□ -0.05
SCN1BQ07699 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SCN1BQ07699 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.74□□□□□ -0.05
SCN1BQ07699 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SCN1BQ07699 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SCN1BQ07699 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SCN1BQ07699 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 AC005332.1-201ENST00000577698 1310 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 MYCLP1-201ENST00000372451 1075 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SCN1BQ07699 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
SCN1BQ07699 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 HLA-J-202ENST00000469281 1241 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.73□□□□□ -0.05
SCN1BQ07699 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.73□□□□□ -0.05
SCN1BQ07699 AC111152.3-201ENST00000569699 673 ntBASIC14.73□□□□□ -0.05
SCN1BQ07699 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms