Protein–RNA interactions for Protein: P84550

SKOR1, SKI family transcriptional corepressor 1, humanhuman

Predictions only

Length 965 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1P84550 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SKOR1P84550 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.35■□□□□ 0.37
SKOR1P84550 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SKOR1P84550 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SKOR1P84550 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 AP002414.1-201ENST00000391405 1147 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 AC073621.1-201ENST00000392730 636 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 PTCHD3P3-201ENST00000403073 906 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 MIR1233-2-201ENST00000408138 82 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 MIR1233-1-201ENST00000408722 82 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.34■□□□□ 0.37
SKOR1P84550 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.34■□□□□ 0.37
SKOR1P84550 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.34■□□□□ 0.37
SKOR1P84550 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.34■□□□□ 0.37
SKOR1P84550 AC012640.2-201ENST00000561606 901 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SKOR1P84550 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.34■□□□□ 0.37
SKOR1P84550 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 AC008735.5-201ENST00000623544 497 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 FAM215A-202ENST00000632077 792 ntBASIC17.34■□□□□ 0.37
SKOR1P84550 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SKOR1P84550 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SKOR1P84550 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.34■□□□□ 0.37
SKOR1P84550 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SKOR1P84550 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SKOR1P84550 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SKOR1P84550 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SKOR1P84550 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SKOR1P84550 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SKOR1P84550 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 PMS2P7-201ENST00000506558 1336 ntBASIC17.33■□□□□ 0.36
SKOR1P84550 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.33■□□□□ 0.36
SKOR1P84550 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.33■□□□□ 0.36
SKOR1P84550 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.33■□□□□ 0.36
SKOR1P84550 AC093909.1-201ENST00000504731 1122 ntBASIC17.33■□□□□ 0.36
SKOR1P84550 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.33■□□□□ 0.36
SKOR1P84550 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 AC092865.5-201ENST00000545435 363 ntBASIC17.33■□□□□ 0.36
SKOR1P84550 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.33■□□□□ 0.36
SKOR1P84550 MIR7706-201ENST00000613747 67 ntBASIC17.33■□□□□ 0.36
SKOR1P84550 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 AL596087.1-201ENST00000400979 1969 ntBASIC17.33■□□□□ 0.36
SKOR1P84550 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.33■□□□□ 0.36
SKOR1P84550 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SKOR1P84550 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.32■□□□□ 0.36
SKOR1P84550 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SKOR1P84550 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SKOR1P84550 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SKOR1P84550 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SKOR1P84550 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.32■□□□□ 0.36
SKOR1P84550 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.32■□□□□ 0.36
SKOR1P84550 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SKOR1P84550 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SKOR1P84550 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SKOR1P84550 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SKOR1P84550 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms