Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNRPFP62306 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNRPFP62306 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRPFP62306 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRPFP62306 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.84■□□□□ 0.45
SNRPFP62306 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRPFP62306 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SNRPFP62306 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNRPFP62306 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.84■□□□□ 0.45
SNRPFP62306 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SNRPFP62306 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SNRPFP62306 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRPFP62306 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SNRPFP62306 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
SNRPFP62306 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.83■□□□□ 0.45
SNRPFP62306 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.83■□□□□ 0.45
SNRPFP62306 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.83■□□□□ 0.45
SNRPFP62306 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.83■□□□□ 0.45
SNRPFP62306 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.83■□□□□ 0.45
SNRPFP62306 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.83■□□□□ 0.44
SNRPFP62306 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.83■□□□□ 0.44
SNRPFP62306 AC069335.1-201ENST00000489972 472 ntBASIC17.83■□□□□ 0.44
SNRPFP62306 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 AC092865.5-201ENST00000545435 363 ntBASIC17.83■□□□□ 0.44
SNRPFP62306 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.83■□□□□ 0.44
SNRPFP62306 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.83■□□□□ 0.44
SNRPFP62306 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.83■□□□□ 0.44
SNRPFP62306 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.83■□□□□ 0.44
SNRPFP62306 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SNRPFP62306 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRPFP62306 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRPFP62306 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SNRPFP62306 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRPFP62306 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNRPFP62306 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 HLA-H-201ENST00000383620 1096 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.82■□□□□ 0.44
SNRPFP62306 AC211486.1-202ENST00000416371 468 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 AC254562.1-201ENST00000417586 456 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRPFP62306 AP006288.1-201ENST00000446065 395 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 AC211476.1-201ENST00000503899 468 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 AC061975.2-201ENST00000581722 295 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.82■□□□□ 0.44
SNRPFP62306 AC004835.2-201ENST00000603762 682 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRPFP62306 AL391005.1-201ENST00000623953 2435 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 AL662844.4-201ENST00000606367 2838 ntBASIC17.82■□□□□ 0.44
SNRPFP62306 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SNRPFP62306 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRPFP62306 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
SNRPFP62306 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SNRPFP62306 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.81■□□□□ 0.44
SNRPFP62306 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.81■□□□□ 0.44
SNRPFP62306 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRPFP62306 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms