Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.54■□□□□ 0.24
AP1S1P61966 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 GPS2P2-201ENST00000430745 888 ntBASIC16.54■□□□□ 0.24
AP1S1P61966 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.54■□□□□ 0.24
AP1S1P61966 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.54■□□□□ 0.24
AP1S1P61966 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.54■□□□□ 0.24
AP1S1P61966 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.54■□□□□ 0.24
AP1S1P61966 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.54■□□□□ 0.24
AP1S1P61966 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 RBPMS2P1-201ENST00000437762 623 ntBASIC16.53■□□□□ 0.24
AP1S1P61966 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 HLA-J-203ENST00000494367 1087 ntBASIC16.53■□□□□ 0.24
AP1S1P61966 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 ALG1L8P-201ENST00000533887 760 ntBASIC16.53■□□□□ 0.24
AP1S1P61966 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.53■□□□□ 0.24
AP1S1P61966 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.53■□□□□ 0.24
AP1S1P61966 AL365330.1-201ENST00000607459 531 ntBASIC16.53■□□□□ 0.24
AP1S1P61966 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP1S1P61966 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP1S1P61966 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.53■□□□□ 0.24
AP1S1P61966 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
AP1S1P61966 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.52■□□□□ 0.24
AP1S1P61966 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
AP1S1P61966 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.52■□□□□ 0.24
AP1S1P61966 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.52■□□□□ 0.24
AP1S1P61966 CROCCP1-201ENST00000426910 5675 ntBASIC16.52■□□□□ 0.24
AP1S1P61966 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
AP1S1P61966 AL592424.1-201ENST00000563624 1536 ntBASIC16.52■□□□□ 0.24
AP1S1P61966 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
AP1S1P61966 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP1S1P61966 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP1S1P61966 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 RARRES2P9-201ENST00000565168 469 ntBASIC16.52■□□□□ 0.24
AP1S1P61966 AC024267.1-201ENST00000582320 895 ntBASIC16.52■□□□□ 0.24
AP1S1P61966 AP001059.3-201ENST00000619053 235 ntBASIC16.52■□□□□ 0.24
AP1S1P61966 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP1S1P61966 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.52■□□□□ 0.24
AP1S1P61966 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.52■□□□□ 0.24
AP1S1P61966 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
AP1S1P61966 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms