Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 ZNF890P-202ENST00000530367 1156 ntBASIC13.7□□□□□ -0.22
RIPPLY3P57055 AC027307.2-201ENST00000591252 911 ntBASIC13.7□□□□□ -0.22
RIPPLY3P57055 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.7□□□□□ -0.22
RIPPLY3P57055 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 CETN4P-206ENST00000642099 2168 ntBASIC13.7□□□□□ -0.22
RIPPLY3P57055 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 BICD1-207ENST00000551848 1962 ntBASIC13.7□□□□□ -0.22
RIPPLY3P57055 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RIPPLY3P57055 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RIPPLY3P57055 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.69□□□□□ -0.22
RIPPLY3P57055 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.69□□□□□ -0.22
RIPPLY3P57055 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 COX5BP2-201ENST00000392354 334 ntBASIC13.69□□□□□ -0.22
RIPPLY3P57055 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 EIF4HP1-201ENST00000453115 687 ntBASIC13.69□□□□□ -0.22
RIPPLY3P57055 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 AL354751.1-201ENST00000412768 1863 ntBASIC13.69□□□□□ -0.22
RIPPLY3P57055 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.69□□□□□ -0.22
RIPPLY3P57055 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIPPLY3P57055 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIPPLY3P57055 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms