Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 CHCHD2P8-201ENST00000429873 447 ntBASIC14.38□□□□□ -0.11
CLDN12P56749 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.38□□□□□ -0.11
CLDN12P56749 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN12P56749 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN12P56749 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CLDN12P56749 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 PCGF3-213ENST00000620529 1899 ntBASIC14.38□□□□□ -0.11
CLDN12P56749 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 AL161772.1-201ENST00000610494 4412 ntBASIC14.38□□□□□ -0.11
CLDN12P56749 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN12P56749 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN12P56749 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN12P56749 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.37□□□□□ -0.11
CLDN12P56749 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 TOP3BP1-201ENST00000420768 1380 ntBASIC14.37□□□□□ -0.11
CLDN12P56749 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN12P56749 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN12P56749 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLDN12P56749 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN12P56749 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 BX276092.5-203ENST00000456199 560 ntBASIC14.37□□□□□ -0.11
CLDN12P56749 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN12P56749 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.37□□□□□ -0.11
CLDN12P56749 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 KRT8P39-201ENST00000396270 1433 ntBASIC14.37□□□□□ -0.11
CLDN12P56749 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.37□□□□□ -0.11
CLDN12P56749 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN12P56749 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLDN12P56749 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN12P56749 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN12P56749 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.36□□□□□ -0.11
CLDN12P56749 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLDN12P56749 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLDN12P56749 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms