Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SPDYE8P-202ENST00000612377 668 ntBASIC17.65■□□□□ 0.42
VCPP55072 AL662799.1-202ENST00000614205 422 ntBASIC17.65■□□□□ 0.42
VCPP55072 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VCPP55072 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.65■□□□□ 0.42
VCPP55072 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VCPP55072 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCPP55072 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VCPP55072 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCPP55072 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.65■□□□□ 0.42
VCPP55072 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.65■□□□□ 0.42
VCPP55072 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VCPP55072 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
VCPP55072 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.65■□□□□ 0.42
VCPP55072 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VCPP55072 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCPP55072 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.65■□□□□ 0.42
VCPP55072 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.65■□□□□ 0.42
VCPP55072 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VCPP55072 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.64■□□□□ 0.41
VCPP55072 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.64■□□□□ 0.41
VCPP55072 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.64■□□□□ 0.41
VCPP55072 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.64■□□□□ 0.41
VCPP55072 AL671277.1-201ENST00000429656 993 ntBASIC17.64■□□□□ 0.41
VCPP55072 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.64■□□□□ 0.41
VCPP55072 AP002490.2-201ENST00000524791 560 ntBASIC17.64■□□□□ 0.41
VCPP55072 AC140878.1-201ENST00000565277 250 ntBASIC17.64■□□□□ 0.41
VCPP55072 SPDYE22P-201ENST00000582158 798 ntBASIC17.64■□□□□ 0.41
VCPP55072 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.64■□□□□ 0.41
VCPP55072 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.64■□□□□ 0.41
VCPP55072 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
VCPP55072 AC011270.2-201ENST00000624293 2550 ntBASIC17.64■□□□□ 0.41
VCPP55072 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VCPP55072 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.64■□□□□ 0.41
VCPP55072 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VCPP55072 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 AL645728.1-201ENST00000366221 2101 ntBASIC17.63■□□□□ 0.41
VCPP55072 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.63■□□□□ 0.41
VCPP55072 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
VCPP55072 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VCPP55072 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VCPP55072 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.63■□□□□ 0.41
VCPP55072 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.63■□□□□ 0.41
VCPP55072 GPS2P2-201ENST00000430745 888 ntBASIC17.63■□□□□ 0.41
VCPP55072 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 AL512638.1-201ENST00000457493 794 ntBASIC17.63■□□□□ 0.41
VCPP55072 SERBP1P5-201ENST00000510079 1181 ntBASIC17.63■□□□□ 0.41
VCPP55072 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.63■□□□□ 0.41
VCPP55072 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.63■□□□□ 0.41
VCPP55072 AC099522.2-201ENST00000607001 744 ntBASIC17.63■□□□□ 0.41
VCPP55072 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.63■□□□□ 0.41
VCPP55072 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
VCPP55072 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.63■□□□□ 0.41
VCPP55072 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.63■□□□□ 0.41
VCPP55072 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
VCPP55072 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VCPP55072 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VCPP55072 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.62■□□□□ 0.41
VCPP55072 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VCPP55072 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VCPP55072 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.62■□□□□ 0.41
VCPP55072 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms