Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.7■□□□□ 0.1
NR1H2P55055 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.7■□□□□ 0.1
NR1H2P55055 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.7■□□□□ 0.1
NR1H2P55055 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NR1H2P55055 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NR1H2P55055 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 PPT1-215ENST00000641471 2368 ntBASIC15.69■□□□□ 0.1
NR1H2P55055 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NR1H2P55055 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H2P55055 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.69■□□□□ 0.1
NR1H2P55055 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 AC106795.1-205ENST00000512851 1056 ntBASIC15.69■□□□□ 0.1
NR1H2P55055 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H2P55055 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NR1H2P55055 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.69■□□□□ 0.1
NR1H2P55055 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H2P55055 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.69■□□□□ 0.1
NR1H2P55055 AC104692.2-201ENST00000603054 253 ntBASIC15.69■□□□□ 0.1
NR1H2P55055 REXO1L6P-202ENST00000619970 1078 ntBASIC15.69■□□□□ 0.1
NR1H2P55055 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.69■□□□□ 0.1
NR1H2P55055 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NR1H2P55055 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NR1H2P55055 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NR1H2P55055 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NR1H2P55055 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NR1H2P55055 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
NR1H2P55055 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.68■□□□□ 0.1
NR1H2P55055 AL022342.1-201ENST00000400363 863 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.68■□□□□ 0.1
NR1H2P55055 AP002469.2-201ENST00000531724 424 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 AP005901.3-202ENST00000581653 237 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 AL591684.3-201ENST00000605187 298 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 AC114341.1-201ENST00000618070 349 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 AC009154.2-201ENST00000621177 724 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 AC104581.4-201ENST00000623126 3052 ntBASIC15.68■□□□□ 0.1
NR1H2P55055 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.68■□□□□ 0.1
NR1H2P55055 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
NR1H2P55055 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NR1H2P55055 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.68■□□□□ 0.1
NR1H2P55055 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms