Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NEK3P51956 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NEK3P51956 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NEK3P51956 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.01■□□□□ 0.31
NEK3P51956 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NEK3P51956 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NEK3P51956 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NEK3P51956 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17■□□□□ 0.31
NEK3P51956 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17■□□□□ 0.31
NEK3P51956 AC105917.1-201ENST00000506637 2539 ntBASIC17■□□□□ 0.31
NEK3P51956 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17■□□□□ 0.31
NEK3P51956 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17■□□□□ 0.31
NEK3P51956 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17■□□□□ 0.31
NEK3P51956 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17■□□□□ 0.31
NEK3P51956 AC112191.1-201ENST00000523689 701 ntBASIC17■□□□□ 0.31
NEK3P51956 AP002472.1-201ENST00000577490 586 ntBASIC17■□□□□ 0.31
NEK3P51956 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17■□□□□ 0.31
NEK3P51956 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17■□□□□ 0.31
NEK3P51956 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17■□□□□ 0.31
NEK3P51956 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NEK3P51956 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 TOP3BP1-201ENST00000420768 1380 ntBASIC17■□□□□ 0.31
NEK3P51956 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NEK3P51956 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NEK3P51956 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17■□□□□ 0.31
NEK3P51956 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NEK3P51956 AC092919.2-201ENST00000623631 1645 ntBASIC16.99■□□□□ 0.31
NEK3P51956 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 AL353732.1-201ENST00000569618 1459 ntBASIC16.99■□□□□ 0.31
NEK3P51956 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 AC254562.1-201ENST00000417586 456 ntBASIC16.99■□□□□ 0.31
NEK3P51956 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.99■□□□□ 0.31
NEK3P51956 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.99■□□□□ 0.31
NEK3P51956 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.99■□□□□ 0.31
NEK3P51956 SNHG9-202ENST00000564014 471 ntBASIC16.99■□□□□ 0.31
NEK3P51956 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.99■□□□□ 0.31
NEK3P51956 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.99■□□□□ 0.31
NEK3P51956 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NEK3P51956 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NEK3P51956 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms