Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 AC136621.1-201ENST00000624017 2304 ntBASIC13.29□□□□□ -0.28
RAB5CP51148 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RAB5CP51148 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RAB5CP51148 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAB5CP51148 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB5CP51148 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RAB5CP51148 STK25P1-201ENST00000585406 838 ntBASIC13.29□□□□□ -0.28
RAB5CP51148 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB5CP51148 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB5CP51148 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.29□□□□□ -0.28
RAB5CP51148 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RAB5CP51148 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RAB5CP51148 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAB5CP51148 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5CP51148 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB5CP51148 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 AC103564.2-201ENST00000432853 1299 ntBASIC13.28□□□□□ -0.28
RAB5CP51148 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.28□□□□□ -0.28
RAB5CP51148 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB5CP51148 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 DUX4L17-201ENST00000557360 1267 ntBASIC13.28□□□□□ -0.28
RAB5CP51148 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
RAB5CP51148 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC13.28□□□□□ -0.28
RAB5CP51148 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 AC004817.3-201ENST00000602957 2129 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms