Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HTR3AP46098 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
HTR3AP46098 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR3AP46098 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR3AP46098 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.27■□□□□ 0.04
HTR3AP46098 IGHV3-22-201ENST00000520721 359 ntBASIC15.27■□□□□ 0.04
HTR3AP46098 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.27■□□□□ 0.04
HTR3AP46098 MIR4751-201ENST00000578027 74 ntBASIC15.27■□□□□ 0.04
HTR3AP46098 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.27■□□□□ 0.04
HTR3AP46098 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR3AP46098 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.27■□□□□ 0.03
HTR3AP46098 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR3AP46098 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR3AP46098 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HTR3AP46098 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HTR3AP46098 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.27■□□□□ 0.03
HTR3AP46098 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.27■□□□□ 0.03
HTR3AP46098 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HTR3AP46098 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HTR3AP46098 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR3AP46098 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 CRYGEP-201ENST00000412192 528 ntBASIC15.26■□□□□ 0.03
HTR3AP46098 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 AC079776.4-201ENST00000511039 504 ntBASIC15.26■□□□□ 0.03
HTR3AP46098 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR3AP46098 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 UNC93B6-202ENST00000528242 690 ntBASIC15.26■□□□□ 0.03
HTR3AP46098 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.26■□□□□ 0.03
HTR3AP46098 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.26■□□□□ 0.03
HTR3AP46098 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.26■□□□□ 0.03
HTR3AP46098 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 RNF216P1-203ENST00000404404 2427 ntBASIC15.26■□□□□ 0.03
HTR3AP46098 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.26■□□□□ 0.03
HTR3AP46098 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.26■□□□□ 0.03
HTR3AP46098 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HTR3AP46098 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HTR3AP46098 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HTR3AP46098 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.25■□□□□ 0.03
HTR3AP46098 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.25■□□□□ 0.03
HTR3AP46098 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HTR3AP46098 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms