Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.31e-5■□□□□ 9
GTF2F1P35269 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.86■□□□□ 0.291e-5■□□□□ 9
GTF2F1P35269 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.86■□□□□ 0.291e-5■□□□□ 9
GTF2F1P35269 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.86■□□□□ 0.291e-5■□□□□ 9
GTF2F1P35269 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.271e-5■□□□□ 9
GTF2F1P35269 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.231e-5■□□□□ 9
GTF2F1P35269 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.221e-5■□□□□ 9
GTF2F1P35269 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.161e-5■□□□□ 9
GTF2F1P35269 HNRNPH3-206ENST00000478698 1507 ntTSL 216.05■□□□□ 0.161e-5■□□□□ 9
GTF2F1P35269 HNRNPH3-210ENST00000490442 1521 ntTSL 216.05■□□□□ 0.161e-5■□□□□ 9
GTF2F1P35269 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.141e-5■□□□□ 9
GTF2F1P35269 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC15.92■□□□□ 0.141e-5■□□□□ 9
GTF2F1P35269 FGFR1-222ENST00000487647 1608 ntTSL 1 (best)15.8■□□□□ 0.121e-5■□□□□ 9
GTF2F1P35269 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.111e-5■□□□□ 9
GTF2F1P35269 NDRG2-258ENST00000556716 2718 ntTSL 215.44■□□□□ 0.061e-5■□□□□ 9
GTF2F1P35269 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC15.11■□□□□ 0.011e-5■□□□□ 9
GTF2F1P35269 FGFR1-227ENST00000526570 5528 ntTSL 1 (best)14.79□□□□□ -0.041e-5■□□□□ 9
GTF2F1P35269 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.061e-5■□□□□ 9
GTF2F1P35269 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.071e-5■□□□□ 9
GTF2F1P35269 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.081e-5■□□□□ 9
GTF2F1P35269 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC14.28□□□□□ -0.121e-5■□□□□ 9
GTF2F1P35269 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.141e-5■□□□□ 9
GTF2F1P35269 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.141e-5■□□□□ 9
GTF2F1P35269 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC13.44□□□□□ -0.261e-5■□□□□ 9
GTF2F1P35269 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC12.92□□□□□ -0.341e-5■□□□□ 9
GTF2F1P35269 NPAS2-204ENST00000448812 774 ntTSL 512.79□□□□□ -0.361e-5■□□□□ 9
GTF2F1P35269 NDRG2-274ENST00000557633 527 ntTSL 312.64□□□□□ -0.391e-5■□□□□ 9
GTF2F1P35269 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.471e-5■□□□□ 9
GTF2F1P35269 NPAS2-211ENST00000492373 552 ntTSL 47.61□□□□□ -1.191e-5■□□□□ 9
GTF2F1P35269 NPAS2-209ENST00000486017 764 ntTSL 37.02□□□□□ -1.291e-5■□□□□ 9
GTF2F1P35269 C2orf42-212ENST00000470096 579 ntTSL 418.29■□□□□ 0.524e-8■□□□□ 9
GTF2F1P35269 TIA1-219ENST00000496452 853 ntTSL 218.29■□□□□ 0.524e-8■□□□□ 9
GTF2F1P35269 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.87■□□□□ 0.454e-8■□□□□ 9
GTF2F1P35269 TIA1-213ENST00000481650 549 ntTSL 415.7■□□□□ 0.14e-8■□□□□ 9
GTF2F1P35269 TIA1-210ENST00000474809 915 ntTSL 514.77□□□□□ -0.054e-8■□□□□ 9
GTF2F1P35269 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.414e-8■□□□□ 9
GTF2F1P35269 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC12.33□□□□□ -0.444e-8■□□□□ 9
GTF2F1P35269 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC9.86□□□□□ -0.834e-8■□□□□ 9
GTF2F1P35269 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC9.27□□□□□ -0.934e-8■□□□□ 9
GTF2F1P35269 TIA1-211ENST00000477044 904 ntTSL 57.95□□□□□ -1.144e-8■□□□□ 9
GTF2F1P35269 TIA1-202ENST00000361692 543 ntTSL 52.59□□□□□ -1.994e-8■□□□□ 9
GTF2F1P35269 LUC7L-207ENST00000426094 2737 ntTSL 1 (best)24.01■■□□□ 1.431e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.44■□□□□ 0.861e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-209ENST00000429378 721 ntTSL 320.09■□□□□ 0.811e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.751e-6■□□□□ 8.9
GTF2F1P35269 ARL6IP4-203ENST00000392433 1370 ntTSL 219.66■□□□□ 0.741e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.19■□□□□ 0.661e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.97■□□□□ 0.631e-6■□□□□ 8.9
GTF2F1P35269 TMC6-219ENST00000591594 614 ntTSL 318.59■□□□□ 0.571e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-213ENST00000464711 2134 ntTSL 218.38■□□□□ 0.531e-6■□□□□ 8.9
GTF2F1P35269 ARFRP1-206ENST00000610774 5178 ntTSL 217.49■□□□□ 0.393e-7■□□□□ 8.9
GTF2F1P35269 SSBP3-201ENST00000326956 2913 ntTSL 217.42■□□□□ 0.381e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-217ENST00000490762 2643 ntTSL 1 (best)17.25■□□□□ 0.351e-6■□□□□ 8.9
GTF2F1P35269 ARFRP1-204ENST00000609537 593 ntTSL 316.28■□□□□ 0.21e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-206ENST00000419516 1211 ntTSL 514.19□□□□□ -0.141e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-220ENST00000495349 1006 ntTSL 214.19□□□□□ -0.141e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC13.76□□□□□ -0.211e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-205ENST00000418978 989 ntTSL 513.51□□□□□ -0.251e-6■□□□□ 8.9
GTF2F1P35269 SSBP3-214ENST00000533209 552 ntTSL 412.98□□□□□ -0.331e-6■□□□□ 8.9
GTF2F1P35269 LUC7L-210ENST00000430864 695 ntTSL 512.81□□□□□ -0.361e-6■□□□□ 8.9
GTF2F1P35269 EIF3B-211ENST00000475415 3745 ntTSL 212.13□□□□□ -0.471e-6■□□□□ 8.9
GTF2F1P35269 SSBP3-207ENST00000426150 851 ntTSL 39.2□□□□□ -0.941e-6■□□□□ 8.9
GTF2F1P35269 SSBP3-211ENST00000528787 577 ntTSL 48.27□□□□□ -1.091e-6■□□□□ 8.9
GTF2F1P35269 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.711e-5■□□□□ 8.9
GTF2F1P35269 DCAF5-204ENST00000553943 736 ntTSL 319.49■□□□□ 0.711e-5■□□□□ 8.9
GTF2F1P35269 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.061e-5■□□□□ 8.9
GTF2F1P35269 DCAF5-206ENST00000554681 759 ntTSL 214.32□□□□□ -0.121e-5■□□□□ 8.9
GTF2F1P35269 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.141e-5■□□□□ 8.9
GTF2F1P35269 ATAD2-202ENST00000517666 4995 ntTSL 513.78□□□□□ -0.21e-5■□□□□ 8.9
GTF2F1P35269 DCAF5-207ENST00000556111 728 ntTSL 313.25□□□□□ -0.291e-5■□□□□ 8.9
GTF2F1P35269 ATAD2-204ENST00000521496 3133 ntTSL 1 (best)12.4□□□□□ -0.421e-5■□□□□ 8.9
GTF2F1P35269 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC9.63□□□□□ -0.871e-5■□□□□ 8.9
GTF2F1P35269 ATAD2-203ENST00000519124 4650 ntTSL 1 (best)7.39□□□□□ -1.231e-5■□□□□ 8.9
GTF2F1P35269 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.42■■□□□ 1.821e-5■□□□□ 8.9
GTF2F1P35269 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.751e-5■□□□□ 8.9
GTF2F1P35269 SPIRE2-209ENST00000566337 1369 ntTSL 524.97■■□□□ 1.591e-5■□□□□ 8.9
GTF2F1P35269 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.561e-5■□□□□ 8.9
GTF2F1P35269 DNAJB12-205ENST00000463786 2116 ntTSL 223.32■■□□□ 1.321e-5■□□□□ 8.9
GTF2F1P35269 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.88■■□□□ 1.091e-5■□□□□ 8.9
GTF2F1P35269 GANAB-203ENST00000524437 671 ntTSL 221.55■■□□□ 1.041e-5■□□□□ 8.9
GTF2F1P35269 TRIM47-204ENST00000587339 1907 ntTSL 1 (best)21.4■■□□□ 1.021e-5■□□□□ 8.9
GTF2F1P35269 TMEM256-PLSCR3-202ENST00000570600 1526 ntAPPRIS ALT2 TSL 221.24■□□□□ 0.991e-5■□□□□ 8.9
GTF2F1P35269 TRIM47-205ENST00000587774 720 ntTSL 221.18■□□□□ 0.981e-5■□□□□ 8.9
GTF2F1P35269 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.951e-5■□□□□ 8.9
GTF2F1P35269 CCDC183-208ENST00000609471 644 ntTSL 219.29■□□□□ 0.681e-5■□□□□ 8.9
GTF2F1P35269 TMEM256-PLSCR3-201ENST00000570569 562 ntAPPRIS P5 TSL 318.89■□□□□ 0.611e-5■□□□□ 8.9
GTF2F1P35269 GANAB-214ENST00000534613 737 ntTSL 518.35■□□□□ 0.531e-5■□□□□ 8.9
GTF2F1P35269 GANAB-204ENST00000525994 390 ntTSL 417.27■□□□□ 0.361e-5■□□□□ 8.9
GTF2F1P35269 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.191e-5■□□□□ 8.9
GTF2F1P35269 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC15.48■□□□□ 0.071e-5■□□□□ 8.9
GTF2F1P35269 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC15.17■□□□□ 0.021e-5■□□□□ 8.9
GTF2F1P35269 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC14.99□□□□□ -0.011e-5■□□□□ 8.9
GTF2F1P35269 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.091e-5■□□□□ 8.9
GTF2F1P35269 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.211e-5■□□□□ 8.9
GTF2F1P35269 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)13.13□□□□□ -0.311e-5■□□□□ 8.9
GTF2F1P35269 GANAB-213ENST00000534422 702 ntTSL 512.47□□□□□ -0.411e-5■□□□□ 8.9
GTF2F1P35269 GANAB-202ENST00000356638 3608 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.61e-5■□□□□ 8.9
GTF2F1P35269 GPATCH8-201ENST00000335500 8109 ntTSL 210□□□□□ -0.811e-5■□□□□ 8.9
GTF2F1P35269 TMEM256-203ENST00000576017 511 ntTSL 39.43□□□□□ -0.91e-5■□□□□ 8.9
GTF2F1P35269 GPAM-203ENST00000480130 514 ntTSL 27.08□□□□□ -1.281e-5■□□□□ 8.9
Retrieved 100 of 18,214 protein–RNA pairs in 293.4 ms