RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
SSBP3-207ENST00000426150 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
SSBP3-207ENST00000426150 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
SSBP3-207ENST00000426150 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
SSBP3-207ENST00000426150 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
SSBP3-207ENST00000426150 FOXD1Q16676 465 aa19.38■□□□□ 0.69
SSBP3-207ENST00000426150 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
SSBP3-207ENST00000426150 ADRA2BP18089 450 aa18.9■□□□□ 0.62
SSBP3-207ENST00000426150 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-207ENST00000426150 KCNA4P22459 653 aa18.23■□□□□ 0.51
SSBP3-207ENST00000426150 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
SSBP3-207ENST00000426150 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
SSBP3-207ENST00000426150 MSH5O43196 834 aa17.6■□□□□ 0.41
SSBP3-207ENST00000426150 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
SSBP3-207ENST00000426150 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
SSBP3-207ENST00000426150 NPM3O75607 178 aaKnown RBP17.31■□□□□ 0.36
SSBP3-207ENST00000426150 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
SSBP3-207ENST00000426150 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
SSBP3-207ENST00000426150 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
SSBP3-207ENST00000426150 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
SSBP3-207ENST00000426150 ZBTB22O15209 634 aa16.8■□□□□ 0.28
SSBP3-207ENST00000426150 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
SSBP3-207ENST00000426150 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
SSBP3-207ENST00000426150 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
SSBP3-207ENST00000426150 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
SSBP3-207ENST00000426150 HOXD11P31277 338 aaPredicted RBP16.52■□□□□ 0.24
SSBP3-207ENST00000426150 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
SSBP3-207ENST00000426150 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
SSBP3-207ENST00000426150 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
SSBP3-207ENST00000426150 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
SSBP3-207ENST00000426150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
SSBP3-207ENST00000426150 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
SSBP3-207ENST00000426150 FKBP8Q14318 412 aa15.55■□□□□ 0.08
SSBP3-207ENST00000426150 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
SSBP3-207ENST00000426150 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-207ENST00000426150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-207ENST00000426150 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SSBP3-207ENST00000426150 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-207ENST00000426150 RTN4Q9NQC3 1192 aaKnown RBP15.41■□□□□ 0.06
SSBP3-207ENST00000426150 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
SSBP3-207ENST00000426150 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
SSBP3-207ENST00000426150 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
SSBP3-207ENST00000426150 APLP2Q06481 763 aa15.15■□□□□ 0.02
SSBP3-207ENST00000426150 SLC24A1O60721 1099 aa15.05■□□□□ -0
SSBP3-207ENST00000426150 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
SSBP3-207ENST00000426150 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
SSBP3-207ENST00000426150 MKRN4PQ13434 485 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-207ENST00000426150 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
SSBP3-207ENST00000426150 TRHP20396 242 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-207ENST00000426150 CAPN15O75808 1086 aa14.8□□□□□ -0.04
SSBP3-207ENST00000426150 FBLN2P98095 1184 aa14.79□□□□□ -0.04
SSBP3-207ENST00000426150 FBXO3Q9UK99 471 aa14.79□□□□□ -0.04
SSBP3-207ENST00000426150 POLA2Q14181 598 aa14.75□□□□□ -0.05
SSBP3-207ENST00000426150 PROM2Q8N271 834 aa14.74□□□□□ -0.05
SSBP3-207ENST00000426150 ABCB7O75027 752 aa14.62□□□□□ -0.07
SSBP3-207ENST00000426150 DSG3P32926 999 aa14.59□□□□□ -0.07
SSBP3-207ENST00000426150 VASPP50552 380 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-207ENST00000426150 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
SSBP3-207ENST00000426150 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
SSBP3-207ENST00000426150 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-207ENST00000426150 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-207ENST00000426150 PKD2Q13563 968 aa14.24□□□□□ -0.13
SSBP3-207ENST00000426150 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
SSBP3-207ENST00000426150 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
SSBP3-207ENST00000426150 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
SSBP3-207ENST00000426150 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
SSBP3-207ENST00000426150 PLCB2Q00722 1185 aa14.22□□□□□ -0.13
SSBP3-207ENST00000426150 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
SSBP3-207ENST00000426150 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
SSBP3-207ENST00000426150 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
SSBP3-207ENST00000426150 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
SSBP3-207ENST00000426150 SPOCK2Q92563 424 aa14.15□□□□□ -0.14
SSBP3-207ENST00000426150 PABPN1Q86U42 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
SSBP3-207ENST00000426150 PLCD3Q8N3E9 789 aa14.07□□□□□ -0.16
SSBP3-207ENST00000426150 MIER1Q8N108 512 aa14.01□□□□□ -0.17
SSBP3-207ENST00000426150 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
SSBP3-207ENST00000426150 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
SSBP3-207ENST00000426150 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-207ENST00000426150 RGL2O15211 777 aa13.87□□□□□ -0.19
SSBP3-207ENST00000426150 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
SSBP3-207ENST00000426150 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
SSBP3-207ENST00000426150 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
SSBP3-207ENST00000426150 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
SSBP3-207ENST00000426150 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
SSBP3-207ENST00000426150 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-207ENST00000426150 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
SSBP3-207ENST00000426150 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
SSBP3-207ENST00000426150 CFAP44Q96MT7 982 aa13.72□□□□□ -0.21
SSBP3-207ENST00000426150 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
SSBP3-207ENST00000426150 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
SSBP3-207ENST00000426150 BCANQ96GW7 911 aa13.69□□□□□ -0.22
SSBP3-207ENST00000426150 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
SSBP3-207ENST00000426150 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
SSBP3-207ENST00000426150 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
SSBP3-207ENST00000426150 REM2Q8IYK8 340 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-207ENST00000426150 SPDYE1Q8NFV5 336 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-207ENST00000426150 GSE1Q14687 1217 aa13.61□□□□□ -0.23
SSBP3-207ENST00000426150 NUBP1P53384 320 aa13.6□□□□□ -0.23
SSBP3-207ENST00000426150 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
SSBP3-207ENST00000426150 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms