Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.59■□□□□ 0.25
LSP1P33241 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 LINC01144-201ENST00000626198 1710 ntBASIC16.59■□□□□ 0.25
LSP1P33241 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSP1P33241 AC087481.3-201ENST00000602886 1894 ntBASIC16.59■□□□□ 0.25
LSP1P33241 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LSP1P33241 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.58■□□□□ 0.25
LSP1P33241 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.58■□□□□ 0.25
LSP1P33241 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 AC232323.1-201ENST00000540724 2099 ntBASIC16.58■□□□□ 0.25
LSP1P33241 REXO1L5P-201ENST00000622260 2098 ntBASIC16.58■□□□□ 0.25
LSP1P33241 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.58■□□□□ 0.25
LSP1P33241 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.58■□□□□ 0.25
LSP1P33241 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSP1P33241 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 AC026396.1-201ENST00000419388 421 ntBASIC16.58■□□□□ 0.24
LSP1P33241 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 EGLN1P1-201ENST00000531623 762 ntBASIC16.58■□□□□ 0.24
LSP1P33241 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LSP1P33241 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.58■□□□□ 0.24
LSP1P33241 GPR32P1-201ENST00000601788 811 ntBASIC16.58■□□□□ 0.24
LSP1P33241 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.58■□□□□ 0.24
LSP1P33241 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.58■□□□□ 0.24
LSP1P33241 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LSP1P33241 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 AC005912.2-201ENST00000619492 2400 ntBASIC16.58■□□□□ 0.24
LSP1P33241 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LSP1P33241 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSP1P33241 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 AC091951.1-201ENST00000512854 2465 ntBASIC16.57■□□□□ 0.24
LSP1P33241 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 AC125634.1-201ENST00000438758 1403 ntBASIC16.57■□□□□ 0.24
LSP1P33241 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 AL355075.4-201ENST00000554988 638 ntBASIC16.57■□□□□ 0.24
LSP1P33241 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.57■□□□□ 0.24
LSP1P33241 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSP1P33241 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LSP1P33241 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms