Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCND1P24385 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
CCND1P24385 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCND1P24385 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCND1P24385 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.65■□□□□ 0.26
CCND1P24385 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.65■□□□□ 0.26
CCND1P24385 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.65■□□□□ 0.26
CCND1P24385 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCND1P24385 LAGE3P1-201ENST00000425356 484 ntBASIC16.65■□□□□ 0.26
CCND1P24385 EMBP1-201ENST00000458200 901 ntBASIC16.65■□□□□ 0.26
CCND1P24385 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.65■□□□□ 0.26
CCND1P24385 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CCND1P24385 RN7SL510P-201ENST00000581311 263 ntBASIC16.65■□□□□ 0.26
CCND1P24385 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 AC006557.2-201ENST00000592985 1240 ntBASIC16.65■□□□□ 0.26
CCND1P24385 AL139424.1-201ENST00000607572 797 ntBASIC16.65■□□□□ 0.26
CCND1P24385 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 AC013268.4-201ENST00000637413 2228 ntBASIC16.65■□□□□ 0.26
CCND1P24385 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 CICP13-201ENST00000422015 2789 ntBASIC16.65■□□□□ 0.26
CCND1P24385 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.65■□□□□ 0.26
CCND1P24385 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCND1P24385 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.65■□□□□ 0.26
CCND1P24385 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.65■□□□□ 0.26
CCND1P24385 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CCND1P24385 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCND1P24385 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCND1P24385 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.26
CCND1P24385 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
CCND1P24385 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.64■□□□□ 0.25
CCND1P24385 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.64■□□□□ 0.25
CCND1P24385 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 AC021087.4-201ENST00000563761 564 ntBASIC16.64■□□□□ 0.25
CCND1P24385 AC064862.7-201ENST00000604520 867 ntBASIC16.64■□□□□ 0.25
CCND1P24385 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 HLA-A-202ENST00000376806 1854 ntBASIC16.64■□□□□ 0.25
CCND1P24385 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCND1P24385 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.64■□□□□ 0.25
CCND1P24385 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CCND1P24385 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCND1P24385 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCND1P24385 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms