Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BCKDHBP21953 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
BCKDHBP21953 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BCKDHBP21953 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
BCKDHBP21953 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BCKDHBP21953 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
BCKDHBP21953 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.15■□□□□ 0.18
BCKDHBP21953 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.15■□□□□ 0.18
BCKDHBP21953 KRT223P-202ENST00000449164 1292 ntBASIC16.15■□□□□ 0.18
BCKDHBP21953 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 AC067852.2-201ENST00000590513 2313 ntBASIC16.15■□□□□ 0.18
BCKDHBP21953 AC020765.3-201ENST00000613051 740 ntBASIC16.15■□□□□ 0.18
BCKDHBP21953 MIR8072-201ENST00000614241 80 ntBASIC16.15■□□□□ 0.18
BCKDHBP21953 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.15■□□□□ 0.18
BCKDHBP21953 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BCKDHBP21953 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
BCKDHBP21953 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 ANKRD19P-201ENST00000338192 862 ntBASIC16.14■□□□□ 0.17
BCKDHBP21953 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.14■□□□□ 0.17
BCKDHBP21953 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.14■□□□□ 0.17
BCKDHBP21953 AL139010.1-201ENST00000454878 894 ntBASIC16.14■□□□□ 0.17
BCKDHBP21953 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.14■□□□□ 0.17
BCKDHBP21953 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
BCKDHBP21953 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
BCKDHBP21953 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.14■□□□□ 0.17
BCKDHBP21953 AL606495.2-201ENST00000605867 535 ntBASIC16.14■□□□□ 0.17
BCKDHBP21953 AC133552.6-201ENST00000613406 534 ntBASIC16.14■□□□□ 0.17
BCKDHBP21953 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.14■□□□□ 0.17
BCKDHBP21953 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
BCKDHBP21953 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BCKDHBP21953 CDC14C-201ENST00000428251 1719 ntBASIC16.14■□□□□ 0.17
BCKDHBP21953 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 NOC2LP2-201ENST00000407594 1944 ntBASIC16.13■□□□□ 0.17
BCKDHBP21953 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 GPAA1P2-202ENST00000606848 1787 ntBASIC16.13■□□□□ 0.17
BCKDHBP21953 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 PCDHB18P-201ENST00000524813 2368 ntBASIC16.13■□□□□ 0.17
BCKDHBP21953 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.13■□□□□ 0.17
BCKDHBP21953 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 AC092337.1-201ENST00000568699 1129 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms