Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.03■□□□□ 0.64
ATP2B1P20020 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 AC140113.2-201ENST00000604370 208 ntBASIC19.03■□□□□ 0.64
ATP2B1P20020 GGT3P-204ENST00000453783 1664 ntBASIC19.03■□□□□ 0.64
ATP2B1P20020 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.03■□□□□ 0.64
ATP2B1P20020 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ATP2B1P20020 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.03■□□□□ 0.64
ATP2B1P20020 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.03■□□□□ 0.64
ATP2B1P20020 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ATP2B1P20020 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATP2B1P20020 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
ATP2B1P20020 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ATP2B1P20020 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ATP2B1P20020 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ATP2B1P20020 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ATP2B1P20020 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ATP2B1P20020 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ATP2B1P20020 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.02■□□□□ 0.64
ATP2B1P20020 RHOQP3-201ENST00000437982 621 ntBASIC19.02■□□□□ 0.64
ATP2B1P20020 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 AL031432.2-201ENST00000566714 459 ntBASIC19.02■□□□□ 0.64
ATP2B1P20020 AL928711.1-201ENST00000570165 459 ntBASIC19.02■□□□□ 0.64
ATP2B1P20020 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 AC023141.13-201ENST00000604991 943 ntBASIC19.02■□□□□ 0.64
ATP2B1P20020 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ATP2B1P20020 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ATP2B1P20020 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
ATP2B1P20020 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2B1P20020 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2B1P20020 DOC2GP-204ENST00000639052 2548 ntBASIC19.02■□□□□ 0.63
ATP2B1P20020 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ATP2B1P20020 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP2B1P20020 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATP2B1P20020 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B1P20020 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ATP2B1P20020 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B1P20020 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
ATP2B1P20020 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B1P20020 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 MED15P5-201ENST00000423150 992 ntBASIC19.01■□□□□ 0.63
ATP2B1P20020 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B1P20020 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.01■□□□□ 0.63
ATP2B1P20020 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.01■□□□□ 0.63
ATP2B1P20020 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
ATP2B1P20020 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.01■□□□□ 0.63
ATP2B1P20020 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
ATP2B1P20020 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 ME2P1-201ENST00000426028 1970 ntBASIC19.01■□□□□ 0.63
ATP2B1P20020 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ATP2B1P20020 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
ATP2B1P20020 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP2B1P20020 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19■□□□□ 0.63
ATP2B1P20020 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19■□□□□ 0.63
ATP2B1P20020 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 KRT18P3-201ENST00000451602 1288 ntBASIC19■□□□□ 0.63
ATP2B1P20020 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19■□□□□ 0.63
ATP2B1P20020 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP2B1P20020 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19■□□□□ 0.63
ATP2B1P20020 AL513190.1-201ENST00000621254 727 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms