Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AL138831.2-201ENST00000606564 490 ntBASIC17.11■□□□□ 0.33
H2AFXP16104 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.11■□□□□ 0.33
H2AFXP16104 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.11■□□□□ 0.33
H2AFXP16104 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
H2AFXP16104 AC117489.1-201ENST00000625169 3217 ntBASIC17.11■□□□□ 0.33
H2AFXP16104 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.11■□□□□ 0.33
H2AFXP16104 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.11■□□□□ 0.33
H2AFXP16104 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2AFXP16104 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.1■□□□□ 0.33
H2AFXP16104 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
H2AFXP16104 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H2AFXP16104 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
H2AFXP16104 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.1■□□□□ 0.33
H2AFXP16104 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.1■□□□□ 0.33
H2AFXP16104 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
H2AFXP16104 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.1■□□□□ 0.33
H2AFXP16104 C2orf69P3-201ENST00000565542 1120 ntBASIC17.1■□□□□ 0.33
H2AFXP16104 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.1■□□□□ 0.33
H2AFXP16104 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.1■□□□□ 0.33
H2AFXP16104 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
H2AFXP16104 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.1■□□□□ 0.33
H2AFXP16104 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.1■□□□□ 0.33
H2AFXP16104 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
H2AFXP16104 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.1■□□□□ 0.33
H2AFXP16104 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2AFXP16104 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.1■□□□□ 0.33
H2AFXP16104 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 AC140479.7-201ENST00000636301 2332 ntBASIC17.09■□□□□ 0.33
H2AFXP16104 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 UNC93B2-201ENST00000285383 730 ntBASIC17.09■□□□□ 0.33
H2AFXP16104 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 AL390955.1-201ENST00000428694 934 ntBASIC17.09■□□□□ 0.33
H2AFXP16104 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.09■□□□□ 0.33
H2AFXP16104 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 AC026471.5-201ENST00000615068 467 ntBASIC17.09■□□□□ 0.33
H2AFXP16104 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.09■□□□□ 0.33
H2AFXP16104 AD001527.2-201ENST00000622994 785 ntBASIC17.09■□□□□ 0.33
H2AFXP16104 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.09■□□□□ 0.33
H2AFXP16104 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 AC148477.4-201ENST00000613430 1793 ntBASIC17.09■□□□□ 0.33
H2AFXP16104 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.09■□□□□ 0.33
H2AFXP16104 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2AFXP16104 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms