Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.3■□□□□ 0.04
UBL4AP11441 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 BX640515.1-201ENST00000617215 977 ntBASIC15.3■□□□□ 0.04
UBL4AP11441 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 CICP14-201ENST00000629111 2732 ntBASIC15.3■□□□□ 0.04
UBL4AP11441 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.3■□□□□ 0.04
UBL4AP11441 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.3■□□□□ 0.04
UBL4AP11441 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.3■□□□□ 0.04
UBL4AP11441 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.3■□□□□ 0.04
UBL4AP11441 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBL4AP11441 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 ZNF259P1-201ENST00000407656 1365 ntBASIC15.29■□□□□ 0.04
UBL4AP11441 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
UBL4AP11441 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.29■□□□□ 0.04
UBL4AP11441 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.29■□□□□ 0.04
UBL4AP11441 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.29■□□□□ 0.04
UBL4AP11441 AL031432.2-201ENST00000566714 459 ntBASIC15.29■□□□□ 0.04
UBL4AP11441 AL928711.1-201ENST00000570165 459 ntBASIC15.29■□□□□ 0.04
UBL4AP11441 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.29■□□□□ 0.04
UBL4AP11441 AC064836.3-201ENST00000607928 673 ntBASIC15.29■□□□□ 0.04
UBL4AP11441 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.29■□□□□ 0.04
UBL4AP11441 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 AC079328.2-201ENST00000561241 3354 ntBASIC15.29■□□□□ 0.04
UBL4AP11441 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.29■□□□□ 0.04
UBL4AP11441 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 AL031731.1-201ENST00000642131 2094 ntBASIC15.29■□□□□ 0.04
UBL4AP11441 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UBL4AP11441 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBL4AP11441 GGT3P-204ENST00000453783 1664 ntBASIC15.28■□□□□ 0.04
UBL4AP11441 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
UBL4AP11441 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
UBL4AP11441 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UBL4AP11441 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.28■□□□□ 0.04
UBL4AP11441 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UBL4AP11441 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UBL4AP11441 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.28■□□□□ 0.04
UBL4AP11441 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.28■□□□□ 0.04
UBL4AP11441 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.28■□□□□ 0.04
UBL4AP11441 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.28■□□□□ 0.04
UBL4AP11441 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.28■□□□□ 0.04
UBL4AP11441 AC007064.4-201ENST00000637740 555 ntBASIC15.28■□□□□ 0.04
UBL4AP11441 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBL4AP11441 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms