Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 GGT4P-201ENST00000623672 1708 ntBASIC16.55■□□□□ 0.24
APOA4P06727 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
APOA4P06727 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
APOA4P06727 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
APOA4P06727 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
APOA4P06727 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
APOA4P06727 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
APOA4P06727 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 SNX33P1-201ENST00000592116 1762 ntBASIC16.54■□□□□ 0.24
APOA4P06727 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 PMS2P1-201ENST00000431037 1228 ntBASIC16.54■□□□□ 0.24
APOA4P06727 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.54■□□□□ 0.24
APOA4P06727 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.54■□□□□ 0.24
APOA4P06727 AC087641.1-201ENST00000557561 1021 ntBASIC16.54■□□□□ 0.24
APOA4P06727 AC034105.1-201ENST00000563488 319 ntBASIC16.54■□□□□ 0.24
APOA4P06727 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.54■□□□□ 0.24
APOA4P06727 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 AC006449.6-201ENST00000612330 2296 ntBASIC16.54■□□□□ 0.24
APOA4P06727 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
APOA4P06727 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
APOA4P06727 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
APOA4P06727 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 AL512652.2-201ENST00000625156 1716 ntBASIC16.53■□□□□ 0.24
APOA4P06727 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.53■□□□□ 0.24
APOA4P06727 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
APOA4P06727 AL671710.1-201ENST00000610245 2349 ntBASIC16.53■□□□□ 0.24
APOA4P06727 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.53■□□□□ 0.24
APOA4P06727 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.53■□□□□ 0.24
APOA4P06727 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
APOA4P06727 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.53■□□□□ 0.24
APOA4P06727 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.53■□□□□ 0.24
APOA4P06727 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
APOA4P06727 HCG4B-203ENST00000450128 991 ntBASIC16.53■□□□□ 0.24
APOA4P06727 POU5F1P6-201ENST00000466990 990 ntBASIC16.53■□□□□ 0.24
APOA4P06727 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.53■□□□□ 0.24
APOA4P06727 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms