Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 AC020765.3-201ENST00000613051 740 ntBASIC13.88□□□□□ -0.19
CD74P04233 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CD74P04233 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 AC073508.3-201ENST00000619697 1419 ntBASIC13.88□□□□□ -0.19
CD74P04233 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD74P04233 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CD74P04233 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
CD74P04233 AC008677.1-201ENST00000519230 1561 ntBASIC13.88□□□□□ -0.19
CD74P04233 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.87□□□□□ -0.19
CD74P04233 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CD74P04233 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.87□□□□□ -0.19
CD74P04233 AL137013.1-201ENST00000432946 1228 ntBASIC13.87□□□□□ -0.19
CD74P04233 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.87□□□□□ -0.19
CD74P04233 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 AC011498.5-201ENST00000592027 486 ntBASIC13.87□□□□□ -0.19
CD74P04233 REXO1L3P-201ENST00000622202 1288 ntBASIC13.87□□□□□ -0.19
CD74P04233 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.87□□□□□ -0.19
CD74P04233 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.87□□□□□ -0.19
CD74P04233 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 CICP13-201ENST00000422015 2789 ntBASIC13.87□□□□□ -0.19
CD74P04233 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD74P04233 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CD74P04233 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 AC087499.1-201ENST00000418141 1075 ntBASIC13.86□□□□□ -0.19
CD74P04233 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.86□□□□□ -0.19
CD74P04233 PAWRP1-201ENST00000451083 565 ntBASIC13.86□□□□□ -0.19
CD74P04233 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.86□□□□□ -0.19
CD74P04233 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.86□□□□□ -0.19
CD74P04233 AC010331.1-201ENST00000611423 582 ntBASIC13.86□□□□□ -0.19
CD74P04233 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
CD74P04233 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms