Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LCATP04180 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LCATP04180 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LCATP04180 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LCATP04180 GPAA1P2-202ENST00000606848 1787 ntBASIC14.45□□□□□ -0.1
LCATP04180 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LCATP04180 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LCATP04180 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.45□□□□□ -0.1
LCATP04180 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.45□□□□□ -0.1
LCATP04180 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.45□□□□□ -0.1
LCATP04180 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.45□□□□□ -0.1
LCATP04180 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.45□□□□□ -0.1
LCATP04180 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 AL121894.2-201ENST00000602977 491 ntBASIC14.45□□□□□ -0.1
LCATP04180 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LCATP04180 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LCATP04180 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCATP04180 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 PCGF3-213ENST00000620529 1899 ntBASIC14.44□□□□□ -0.1
LCATP04180 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.44□□□□□ -0.1
LCATP04180 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.44□□□□□ -0.1
LCATP04180 AL031432.2-201ENST00000566714 459 ntBASIC14.44□□□□□ -0.1
LCATP04180 AL928711.1-201ENST00000570165 459 ntBASIC14.44□□□□□ -0.1
LCATP04180 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
LCATP04180 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.44□□□□□ -0.1
LCATP04180 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.44□□□□□ -0.1
LCATP04180 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.44□□□□□ -0.1
LCATP04180 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.44□□□□□ -0.1
LCATP04180 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.44□□□□□ -0.1
LCATP04180 AL645728.2-201ENST00000641974 660 ntBASIC14.44□□□□□ -0.1
LCATP04180 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.44□□□□□ -0.1
LCATP04180 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LCATP04180 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 CYP2T1P-202ENST00000641596 2535 ntBASIC14.44□□□□□ -0.1
LCATP04180 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.44□□□□□ -0.1
LCATP04180 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LCATP04180 MIR600HG-201ENST00000449175 5984 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms