Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHRNA1P02708 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CHRNA1P02708 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CHRNA1P02708 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CHRNA1P02708 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.77■□□□□ 0.43
CHRNA1P02708 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
CHRNA1P02708 GGT3P-204ENST00000453783 1664 ntBASIC17.77■□□□□ 0.43
CHRNA1P02708 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRNA1P02708 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 AL136982.4-201ENST00000437689 1740 ntBASIC17.76■□□□□ 0.43
CHRNA1P02708 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.76■□□□□ 0.43
CHRNA1P02708 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.76■□□□□ 0.43
CHRNA1P02708 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.76■□□□□ 0.43
CHRNA1P02708 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CHRNA1P02708 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.76■□□□□ 0.43
CHRNA1P02708 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.76■□□□□ 0.43
CHRNA1P02708 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.76■□□□□ 0.43
CHRNA1P02708 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CHRNA1P02708 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHRNA1P02708 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.75■□□□□ 0.43
CHRNA1P02708 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 LINC01144-201ENST00000626198 1710 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
CHRNA1P02708 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
CHRNA1P02708 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 RNF216P1-203ENST00000404404 2427 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHRNA1P02708 AL512384.1-201ENST00000406683 331 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.75■□□□□ 0.43
CHRNA1P02708 HIST3H2BA-201ENST00000436555 524 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 ATP5G2P4-201ENST00000442175 420 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.75■□□□□ 0.43
CHRNA1P02708 AC055876.2-201ENST00000531834 546 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 TPRX2P-201ENST00000535362 881 ntBASIC17.75■□□□□ 0.43
CHRNA1P02708 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.75■□□□□ 0.43
CHRNA1P02708 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CHRNA1P02708 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
CHRNA1P02708 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.75■□□□□ 0.43
CHRNA1P02708 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHRNA1P02708 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHRNA1P02708 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.74■□□□□ 0.43
CHRNA1P02708 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.74■□□□□ 0.43
CHRNA1P02708 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHRNA1P02708 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHRNA1P02708 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHRNA1P02708 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms