Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNOT4O95628 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CNOT4O95628 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CNOT4O95628 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 AC022211.2-201ENST00000585075 2527 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CNOT4O95628 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CNOT4O95628 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.67□□□□□ -0.06
CNOT4O95628 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 AC060834.1-201ENST00000443027 2032 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CNOT4O95628 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 KRT18P34-201ENST00000488218 1270 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.67□□□□□ -0.06
CNOT4O95628 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 AL135744.1-201ENST00000565098 629 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 AC022145.2-201ENST00000598203 171 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.67□□□□□ -0.06
CNOT4O95628 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.67□□□□□ -0.06
CNOT4O95628 AC093028.1-201ENST00000622998 982 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CNOT4O95628 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.67□□□□□ -0.06
CNOT4O95628 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 AC011676.5-201ENST00000624864 2660 ntBASIC14.67□□□□□ -0.06
CNOT4O95628 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNOT4O95628 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CNOT4O95628 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CNOT4O95628 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT4O95628 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT4O95628 AL035633.1-201ENST00000406139 838 ntBASIC14.66□□□□□ -0.06
CNOT4O95628 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CNOT4O95628 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.66□□□□□ -0.06
CNOT4O95628 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
CNOT4O95628 SPCS2P1-201ENST00000561636 679 ntBASIC14.66□□□□□ -0.06
CNOT4O95628 AC004449.1-201ENST00000564240 433 ntBASIC14.66□□□□□ -0.06
CNOT4O95628 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CNOT4O95628 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.66□□□□□ -0.06
CNOT4O95628 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
CNOT4O95628 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CNOT4O95628 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT4O95628 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.66□□□□□ -0.06
CNOT4O95628 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CNOT4O95628 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms