Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 REXO1L8P-201ENST00000604378 1897 ntBASIC16.59■□□□□ 0.25
VAPBO95292 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 HCG4B-203ENST00000450128 991 ntBASIC16.59■□□□□ 0.25
VAPBO95292 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
VAPBO95292 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.59■□□□□ 0.25
VAPBO95292 AL031432.2-201ENST00000566714 459 ntBASIC16.59■□□□□ 0.25
VAPBO95292 AL928711.1-201ENST00000570165 459 ntBASIC16.59■□□□□ 0.25
VAPBO95292 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.59■□□□□ 0.25
VAPBO95292 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.59■□□□□ 0.25
VAPBO95292 AL645728.2-201ENST00000641974 660 ntBASIC16.59■□□□□ 0.25
VAPBO95292 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.59■□□□□ 0.25
VAPBO95292 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.59■□□□□ 0.25
VAPBO95292 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VAPBO95292 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.58■□□□□ 0.25
VAPBO95292 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.58■□□□□ 0.25
VAPBO95292 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
VAPBO95292 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VAPBO95292 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.58■□□□□ 0.25
VAPBO95292 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VAPBO95292 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.58■□□□□ 0.25
VAPBO95292 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VAPBO95292 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
VAPBO95292 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.58■□□□□ 0.24
VAPBO95292 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
VAPBO95292 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.58■□□□□ 0.24
VAPBO95292 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.58■□□□□ 0.24
VAPBO95292 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.58■□□□□ 0.24
VAPBO95292 Z83851.2-201ENST00000609564 659 ntBASIC16.58■□□□□ 0.24
VAPBO95292 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.58■□□□□ 0.24
VAPBO95292 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.58■□□□□ 0.24
VAPBO95292 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.58■□□□□ 0.24
VAPBO95292 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.58■□□□□ 0.24
VAPBO95292 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
VAPBO95292 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.58■□□□□ 0.24
VAPBO95292 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.58■□□□□ 0.24
VAPBO95292 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
VAPBO95292 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.58■□□□□ 0.24
VAPBO95292 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
VAPBO95292 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.57■□□□□ 0.24
VAPBO95292 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.57■□□□□ 0.24
VAPBO95292 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.57■□□□□ 0.24
VAPBO95292 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.57■□□□□ 0.24
VAPBO95292 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
VAPBO95292 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.57■□□□□ 0.24
VAPBO95292 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VAPBO95292 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.57■□□□□ 0.24
VAPBO95292 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.57■□□□□ 0.24
VAPBO95292 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.57■□□□□ 0.24
VAPBO95292 AL031055.1-201ENST00000606362 631 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms