Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN3O95197 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 AL512652.2-201ENST00000625156 1716 ntBASIC17.38■□□□□ 0.37
RTN3O95197 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN3O95197 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN3O95197 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 AC006538.1-201ENST00000567905 1585 ntBASIC17.37■□□□□ 0.37
RTN3O95197 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 AC005915.1-201ENST00000624912 2018 ntBASIC17.37■□□□□ 0.37
RTN3O95197 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 GPS2P2-201ENST00000430745 888 ntBASIC17.37■□□□□ 0.37
RTN3O95197 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN3O95197 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN3O95197 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RTN3O95197 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN3O95197 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.36■□□□□ 0.37
RTN3O95197 CYMP-203ENST00000474680 1263 ntBASIC17.36■□□□□ 0.37
RTN3O95197 AC067863.1-201ENST00000494933 530 ntBASIC17.36■□□□□ 0.37
RTN3O95197 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.36■□□□□ 0.37
RTN3O95197 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 AC015911.4-201ENST00000588022 1070 ntBASIC17.36■□□□□ 0.37
RTN3O95197 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN3O95197 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN3O95197 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
RTN3O95197 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN3O95197 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN3O95197 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN3O95197 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN3O95197 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms