Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.83■□□□□ 0.12
SEMA3DO95025 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.83■□□□□ 0.12
SEMA3DO95025 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 AC064836.3-201ENST00000607928 673 ntBASIC15.83■□□□□ 0.12
SEMA3DO95025 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SEMA3DO95025 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.83■□□□□ 0.12
SEMA3DO95025 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 IL9RP2-201ENST00000423948 1312 ntBASIC15.83■□□□□ 0.12
SEMA3DO95025 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.83■□□□□ 0.12
SEMA3DO95025 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.83■□□□□ 0.12
SEMA3DO95025 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SEMA3DO95025 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.83■□□□□ 0.12
SEMA3DO95025 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
SEMA3DO95025 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SEMA3DO95025 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SEMA3DO95025 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SEMA3DO95025 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SEMA3DO95025 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SEMA3DO95025 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.82■□□□□ 0.12
SEMA3DO95025 AC063926.3-201ENST00000624734 5658 ntBASIC15.82■□□□□ 0.12
SEMA3DO95025 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SEMA3DO95025 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.82■□□□□ 0.12
SEMA3DO95025 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.82■□□□□ 0.12
SEMA3DO95025 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 RPL13AP23-201ENST00000480739 586 ntBASIC15.82■□□□□ 0.12
SEMA3DO95025 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.82■□□□□ 0.12
SEMA3DO95025 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.82■□□□□ 0.12
SEMA3DO95025 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.82■□□□□ 0.12
SEMA3DO95025 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
SEMA3DO95025 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 AL121894.2-201ENST00000602977 491 ntBASIC15.82■□□□□ 0.12
SEMA3DO95025 BX640515.1-201ENST00000617215 977 ntBASIC15.82■□□□□ 0.12
SEMA3DO95025 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA3DO95025 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA3DO95025 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA3DO95025 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.81■□□□□ 0.12
SEMA3DO95025 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.81■□□□□ 0.12
SEMA3DO95025 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA3DO95025 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SEMA3DO95025 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.81■□□□□ 0.12
SEMA3DO95025 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA3DO95025 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.81■□□□□ 0.12
SEMA3DO95025 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 934.7 ms