Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.46■□□□□ 0.07
HCN1O60741 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.46■□□□□ 0.07
HCN1O60741 MKNK2P1-201ENST00000437526 628 ntBASIC15.46■□□□□ 0.07
HCN1O60741 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.46■□□□□ 0.07
HCN1O60741 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.46■□□□□ 0.07
HCN1O60741 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.46■□□□□ 0.07
HCN1O60741 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.46■□□□□ 0.07
HCN1O60741 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.46■□□□□ 0.07
HCN1O60741 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
HCN1O60741 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
HCN1O60741 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
HCN1O60741 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HCN1O60741 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.46■□□□□ 0.07
HCN1O60741 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCN1O60741 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.46■□□□□ 0.06
HCN1O60741 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
HCN1O60741 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.46■□□□□ 0.06
HCN1O60741 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCN1O60741 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.46■□□□□ 0.06
HCN1O60741 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCN1O60741 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCN1O60741 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCN1O60741 AC063926.3-201ENST00000624734 5658 ntBASIC15.46■□□□□ 0.06
HCN1O60741 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HCN1O60741 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 AC068587.6-202ENST00000641839 5619 ntBASIC15.45■□□□□ 0.06
HCN1O60741 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
HCN1O60741 FAM185BP-201ENST00000443595 716 ntBASIC15.45■□□□□ 0.06
HCN1O60741 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HCN1O60741 KRT19P2-202ENST00000557173 1012 ntBASIC15.45■□□□□ 0.06
HCN1O60741 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 AL513190.1-201ENST00000621254 727 ntBASIC15.45■□□□□ 0.06
HCN1O60741 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HCN1O60741 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.45■□□□□ 0.06
HCN1O60741 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HCN1O60741 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.44■□□□□ 0.06
HCN1O60741 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HCN1O60741 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.44■□□□□ 0.06
HCN1O60741 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
HCN1O60741 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 AC211486.1-202ENST00000416371 468 ntBASIC15.44■□□□□ 0.06
HCN1O60741 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.44■□□□□ 0.06
HCN1O60741 AC092183.1-201ENST00000469884 875 ntBASIC15.44■□□□□ 0.06
HCN1O60741 AC211476.1-201ENST00000503899 468 ntBASIC15.44■□□□□ 0.06
HCN1O60741 YBX1P5-201ENST00000509441 847 ntBASIC15.44■□□□□ 0.06
HCN1O60741 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.44■□□□□ 0.06
HCN1O60741 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
HCN1O60741 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.44■□□□□ 0.06
HCN1O60741 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HCN1O60741 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms