Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC142381.1-201ENST00000426099 345 ntBASIC16.33■□□□□ 0.2
PCDHGA12O60330 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 RARRES2P9-201ENST00000565168 469 ntBASIC16.33■□□□□ 0.2
PCDHGA12O60330 MPDU1-223ENST00000582151 728 ntBASIC16.33■□□□□ 0.2
PCDHGA12O60330 AC021097.1-201ENST00000607902 574 ntBASIC16.33■□□□□ 0.2
PCDHGA12O60330 AC007967.4-201ENST00000614700 386 ntBASIC16.33■□□□□ 0.2
PCDHGA12O60330 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 AC025048.6-201ENST00000634326 1161 ntBASIC16.33■□□□□ 0.2
PCDHGA12O60330 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA12O60330 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA12O60330 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 AL138918.1-201ENST00000568306 659 ntBASIC16.32■□□□□ 0.2
PCDHGA12O60330 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 AC073389.1-201ENST00000595595 795 ntBASIC16.32■□□□□ 0.2
PCDHGA12O60330 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA12O60330 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA12O60330 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 AC022144.1-201ENST00000602255 1580 ntBASIC16.31■□□□□ 0.2
PCDHGA12O60330 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 NME2P1-201ENST00000426182 414 ntBASIC16.31■□□□□ 0.2
PCDHGA12O60330 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 HLA-J-202ENST00000469281 1241 ntBASIC16.31■□□□□ 0.2
PCDHGA12O60330 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms