Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
LCMT2O60294 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
LCMT2O60294 AC211486.1-202ENST00000416371 468 ntBASIC15.75■□□□□ 0.11
LCMT2O60294 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.75■□□□□ 0.11
LCMT2O60294 SPCS2P4-201ENST00000436160 681 ntBASIC15.75■□□□□ 0.11
LCMT2O60294 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.75■□□□□ 0.11
LCMT2O60294 AC093724.1-201ENST00000448659 1027 ntBASIC15.75■□□□□ 0.11
LCMT2O60294 AC211476.1-201ENST00000503899 468 ntBASIC15.75■□□□□ 0.11
LCMT2O60294 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 AC027307.2-201ENST00000591252 911 ntBASIC15.75■□□□□ 0.11
LCMT2O60294 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.75■□□□□ 0.11
LCMT2O60294 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LCMT2O60294 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LCMT2O60294 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LCMT2O60294 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LCMT2O60294 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LCMT2O60294 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 POU5F1P6-201ENST00000466990 990 ntBASIC15.74■□□□□ 0.11
LCMT2O60294 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.74■□□□□ 0.11
LCMT2O60294 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.74■□□□□ 0.11
LCMT2O60294 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LCMT2O60294 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.74■□□□□ 0.11
LCMT2O60294 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.74■□□□□ 0.11
LCMT2O60294 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.74■□□□□ 0.11
LCMT2O60294 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LCMT2O60294 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
LCMT2O60294 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LCMT2O60294 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LCMT2O60294 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.74■□□□□ 0.11
LCMT2O60294 REXO1L8P-201ENST00000604378 1897 ntBASIC15.74■□□□□ 0.11
LCMT2O60294 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 AC004461.1-201ENST00000412461 403 ntBASIC15.73■□□□□ 0.11
LCMT2O60294 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms