Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.4■□□□□ 0.86
SRGAP3O43295 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SRGAP3O43295 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SRGAP3O43295 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRGAP3O43295 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SRGAP3O43295 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SRGAP3O43295 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRGAP3O43295 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRGAP3O43295 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.39■□□□□ 0.86
SRGAP3O43295 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.39■□□□□ 0.86
SRGAP3O43295 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.39■□□□□ 0.86
SRGAP3O43295 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 SPDYE14P-201ENST00000442619 822 ntBASIC20.39■□□□□ 0.85
SRGAP3O43295 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.39■□□□□ 0.85
SRGAP3O43295 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 ALG1L8P-201ENST00000533887 760 ntBASIC20.39■□□□□ 0.85
SRGAP3O43295 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.39■□□□□ 0.85
SRGAP3O43295 AC026150.2-201ENST00000564693 1156 ntBASIC20.39■□□□□ 0.85
SRGAP3O43295 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SRGAP3O43295 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.39■□□□□ 0.85
SRGAP3O43295 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.39■□□□□ 0.85
SRGAP3O43295 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.39■□□□□ 0.85
SRGAP3O43295 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.39■□□□□ 0.85
SRGAP3O43295 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SRGAP3O43295 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.38■□□□□ 0.85
SRGAP3O43295 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 AP3S2-216ENST00000617003 1561 ntBASIC20.38■□□□□ 0.85
SRGAP3O43295 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
SRGAP3O43295 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SRGAP3O43295 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.38■□□□□ 0.85
SRGAP3O43295 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.38■□□□□ 0.85
SRGAP3O43295 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.38■□□□□ 0.85
SRGAP3O43295 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.38■□□□□ 0.85
SRGAP3O43295 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 AC093028.1-201ENST00000622998 982 ntBASIC20.38■□□□□ 0.85
SRGAP3O43295 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 REXO1L8P-201ENST00000604378 1897 ntBASIC20.38■□□□□ 0.85
SRGAP3O43295 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.38■□□□□ 0.85
SRGAP3O43295 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SRGAP3O43295 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRGAP3O43295 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRGAP3O43295 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 U82695.1-201ENST00000635752 1889 ntBASIC20.37■□□□□ 0.85
SRGAP3O43295 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SRGAP3O43295 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.37■□□□□ 0.85
SRGAP3O43295 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.37■□□□□ 0.85
SRGAP3O43295 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms