Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CASQ2O14958 LINC01101-201ENST00000622953 1884 ntBASIC15.69■□□□□ 0.1
CASQ2O14958 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
CASQ2O14958 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CASQ2O14958 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CASQ2O14958 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CASQ2O14958 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 C8orf49-201ENST00000525043 1968 ntBASIC15.68■□□□□ 0.1
CASQ2O14958 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 AC103564.2-201ENST00000432853 1299 ntBASIC15.68■□□□□ 0.1
CASQ2O14958 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.68■□□□□ 0.1
CASQ2O14958 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.68■□□□□ 0.1
CASQ2O14958 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CASQ2O14958 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.68■□□□□ 0.1
CASQ2O14958 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.68■□□□□ 0.1
CASQ2O14958 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.68■□□□□ 0.1
CASQ2O14958 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 AC106881.1-201ENST00000605849 3329 ntBASIC15.68■□□□□ 0.1
CASQ2O14958 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CASQ2O14958 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.67■□□□□ 0.1
CASQ2O14958 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASQ2O14958 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 AL671710.1-201ENST00000610245 2349 ntBASIC15.67■□□□□ 0.1
CASQ2O14958 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CASQ2O14958 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.67■□□□□ 0.1
CASQ2O14958 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CASQ2O14958 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.67■□□□□ 0.1
CASQ2O14958 AP003733.1-201ENST00000491725 852 ntBASIC15.67■□□□□ 0.1
CASQ2O14958 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.67■□□□□ 0.1
CASQ2O14958 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CASQ2O14958 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.67■□□□□ 0.1
CASQ2O14958 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CASQ2O14958 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
CASQ2O14958 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms