Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC22.41■■□□□ 1.18
CHD2O14647 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHD2O14647 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHD2O14647 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC22.41■■□□□ 1.18
CHD2O14647 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC22.41■■□□□ 1.18
CHD2O14647 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CHD2O14647 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHD2O14647 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHD2O14647 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHD2O14647 AC004987.2-201ENST00000395959 1148 ntBASIC22.41■■□□□ 1.18
CHD2O14647 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHD2O14647 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CHD2O14647 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC22.41■■□□□ 1.18
CHD2O14647 OARD1-212ENST00000482515 832 ntTSL 2 BASIC22.41■■□□□ 1.18
CHD2O14647 SLED1-202ENST00000512051 380 ntBASIC22.41■■□□□ 1.18
CHD2O14647 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.41■■□□□ 1.18
CHD2O14647 AC107373.2-201ENST00000607735 490 ntBASIC22.41■■□□□ 1.18
CHD2O14647 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC22.4■■□□□ 1.18
CHD2O14647 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 REXO1L8P-201ENST00000604378 1897 ntBASIC22.4■■□□□ 1.18
CHD2O14647 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 AC134043.2-201ENST00000624206 2238 ntBASIC22.4■■□□□ 1.18
CHD2O14647 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 AC067852.2-201ENST00000590513 2313 ntBASIC22.4■■□□□ 1.18
CHD2O14647 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC22.4■■□□□ 1.18
CHD2O14647 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 GGT3P-204ENST00000453783 1664 ntBASIC22.4■■□□□ 1.18
CHD2O14647 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC22.4■■□□□ 1.18
CHD2O14647 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC22.4■■□□□ 1.18
CHD2O14647 AC025279.2-201ENST00000569730 653 ntBASIC22.4■■□□□ 1.18
CHD2O14647 AC091271.1-201ENST00000611877 1162 ntBASIC22.4■■□□□ 1.18
CHD2O14647 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CHD2O14647 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CHD2O14647 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC22.4■■□□□ 1.18
CHD2O14647 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHD2O14647 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CHD2O14647 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHD2O14647 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CHD2O14647 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CHD2O14647 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
CHD2O14647 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.39■■□□□ 1.18
CHD2O14647 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CHD2O14647 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CHD2O14647 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC22.39■■□□□ 1.17
CHD2O14647 REEP1-202ENST00000453231 940 ntTSL 2 BASIC22.39■■□□□ 1.17
CHD2O14647 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
CHD2O14647 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC22.39■■□□□ 1.17
CHD2O14647 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC22.39■■□□□ 1.17
CHD2O14647 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC22.39■■□□□ 1.17
CHD2O14647 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC22.39■■□□□ 1.17
CHD2O14647 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC22.39■■□□□ 1.17
CHD2O14647 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC22.39■■□□□ 1.17
CHD2O14647 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CHD2O14647 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC22.38■■□□□ 1.17
CHD2O14647 BRF1-202ENST00000379932 884 ntTSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD2O14647 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC22.38■■□□□ 1.17
CHD2O14647 SCARNA20.5-201ENST00000516991 142 ntBASIC22.38■■□□□ 1.17
CHD2O14647 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHD2O14647 CHMP4BP1-201ENST00000556017 588 ntBASIC22.38■■□□□ 1.17
CHD2O14647 AC016629.1-201ENST00000596579 586 ntBASIC22.38■■□□□ 1.17
CHD2O14647 AL022328.3-201ENST00000607943 679 ntBASIC22.38■■□□□ 1.17
CHD2O14647 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CHD2O14647 AC005622.1-201ENST00000636801 1703 ntBASIC22.38■■□□□ 1.17
CHD2O14647 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD2O14647 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD2O14647 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC22.38■■□□□ 1.17
CHD2O14647 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
CHD2O14647 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CHD2O14647 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC22.38■■□□□ 1.17
CHD2O14647 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHD2O14647 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22.38■■□□□ 1.17
CHD2O14647 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 AL603756.1-201ENST00000606511 2163 ntBASIC22.37■■□□□ 1.17
CHD2O14647 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms