Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.5■□□□□ 0.07
KPNA4O00629 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.5■□□□□ 0.07
KPNA4O00629 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
KPNA4O00629 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.5■□□□□ 0.07
KPNA4O00629 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.5■□□□□ 0.07
KPNA4O00629 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.5■□□□□ 0.07
KPNA4O00629 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.5■□□□□ 0.07
KPNA4O00629 AL391256.1-201ENST00000443260 1855 ntBASIC15.5■□□□□ 0.07
KPNA4O00629 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
KPNA4O00629 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.5■□□□□ 0.07
KPNA4O00629 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KPNA4O00629 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 C8orf49-201ENST00000525043 1968 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 TNRC18P2-201ENST00000417666 2714 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 AC092364.2-201ENST00000596710 2692 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 HLA-A-202ENST00000376806 1854 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
KPNA4O00629 KRT16P4-201ENST00000453883 522 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 AC073592.4-201ENST00000623827 446 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 AP005117.1-201ENST00000584346 1413 ntBASIC15.49■□□□□ 0.07
KPNA4O00629 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
KPNA4O00629 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
KPNA4O00629 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.49■□□□□ 0.07
KPNA4O00629 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.48■□□□□ 0.07
KPNA4O00629 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
KPNA4O00629 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
KPNA4O00629 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
KPNA4O00629 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.48■□□□□ 0.07
KPNA4O00629 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.48■□□□□ 0.07
KPNA4O00629 HCG4P8-203ENST00000443049 980 ntBASIC15.48■□□□□ 0.07
KPNA4O00629 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.48■□□□□ 0.07
KPNA4O00629 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms