Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 HCG4-201ENST00000418983 998 ntBASIC17.52■□□□□ 0.4
RCCD1A6NED2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 AF238378.1-201ENST00000526806 358 ntBASIC17.52■□□□□ 0.4
RCCD1A6NED2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 AP001350.2-201ENST00000625104 1094 ntBASIC17.52■□□□□ 0.4
RCCD1A6NED2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 AC107918.4-202ENST00000641623 219 ntBASIC17.52■□□□□ 0.4
RCCD1A6NED2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCCD1A6NED2 TSPY26P-202ENST00000565928 3884 ntBASIC17.52■□□□□ 0.39
RCCD1A6NED2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCCD1A6NED2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCCD1A6NED2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.52■□□□□ 0.39
RCCD1A6NED2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCCD1A6NED2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RCCD1A6NED2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RCCD1A6NED2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 AC129492.6-201ENST00000611383 1305 ntBASIC17.51■□□□□ 0.39
RCCD1A6NED2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 AC092919.2-201ENST00000623631 1645 ntBASIC17.51■□□□□ 0.39
RCCD1A6NED2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 TSPY19P-201ENST00000418461 509 ntBASIC17.51■□□□□ 0.39
RCCD1A6NED2 TSPY18P-201ENST00000441642 509 ntBASIC17.51■□□□□ 0.39
RCCD1A6NED2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 OR7E47P-204ENST00000575924 449 ntBASIC17.51■□□□□ 0.39
RCCD1A6NED2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RCCD1A6NED2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
RCCD1A6NED2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 CROCCP1-201ENST00000426910 5675 ntBASIC17.5■□□□□ 0.39
RCCD1A6NED2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 LAGE3P1-201ENST00000425356 484 ntBASIC17.5■□□□□ 0.39
RCCD1A6NED2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.5■□□□□ 0.39
RCCD1A6NED2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RCCD1A6NED2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RCCD1A6NED2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms