Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV9S1A1TA0A576 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 DBET-201ENST00000630918 3363 ntBASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 RPS2P1-201ENST00000434010 821 ntBASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 IGHV3-65-201ENST00000523210 341 ntBASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 PRELID1P1-202ENST00000567272 903 ntBASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 TSPY26P-202ENST00000565928 3884 ntBASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV9S1A1TA0A576 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 PGM5P2-202ENST00000637225 1043 ntBASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 AC012569.1-201ENST00000591191 1524 ntBASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 AC073347.1-201ENST00000421633 2643 ntBASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TCRBV9S1A1TA0A576 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV9S1A1TA0A576 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV9S1A1TA0A576 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV9S1A1TA0A576 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.58■□□□□ 0.25
TCRBV9S1A1TA0A576 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TCRBV9S1A1TA0A576 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.58■□□□□ 0.24
TCRBV9S1A1TA0A576 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms