Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 AC131009.4-201ENST00000624048 1740 ntBASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 HCG4-201ENST00000418983 998 ntBASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 IGHV3-22-201ENST00000520721 359 ntBASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 UNC93B6-202ENST00000528242 690 ntBASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HLA-DRB4X5D2U9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AC009947.1-201ENST00000444350 727 ntBASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 RNA5SP415-201ENST00000517246 115 ntBASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AC087641.1-201ENST00000557561 1021 ntBASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AL121894.2-201ENST00000602977 491 ntBASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HLA-DRB4X5D2U9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms