Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 AC041040.2-201ENST00000622926 2899 ntBASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 AL390755.1-201ENST00000623716 2027 ntBASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 GGT3P-204ENST00000453783 1664 ntBASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 AC107918.4-201ENST00000641966 3141 ntBASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAPPC1Q9Y5R8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 AC069544.1-201ENST00000609399 999 ntBASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAPPC1Q9Y5R8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AC087481.3-201ENST00000602886 1894 ntBASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AC011506.1-201ENST00000474329 610 ntBASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 CA15P1-201ENST00000481698 905 ntBASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 AP000692.2-201ENST00000608391 879 ntBASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAPPC1Q9Y5R8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms