Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AC016027.1-202ENST00000607927 1699 ntBASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AC005237.2-201ENST00000434368 219 ntBASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 SPCS2P4-201ENST00000436160 681 ntBASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AC027796.2-201ENST00000575326 344 ntBASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.42■□□□□ 0.54
COL4A3BPQ9Y5P4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 AC018695.7-201ENST00000624587 2492 ntBASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 AC020765.3-201ENST00000613051 740 ntBASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.41■□□□□ 0.54
COL4A3BPQ9Y5P4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COL4A3BPQ9Y5P4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms